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Class: BaseTableObject

AnnData Table object stream.

URI: vega_scverse:BaseTableObject

classDiagram class BaseTableObject click BaseTableObject href "../BaseTableObject" DataObject <|-- BaseTableObject click DataObject href "../DataObject" BaseTableObject : format BaseTableObject --> "1" ElementFormat : format click ElementFormat href "../ElementFormat" BaseTableObject : name BaseTableObject : source BaseTableObject : transform BaseTableObject --> "1..*" FilterTransform : transform click FilterTransform href "../FilterTransform"

Inheritance

Slots

Name Cardinality and Range Description Inheritance
format 1
ElementFormat		 direct
source 1
String		 The source of the SpatialData element direct
transform 1..*
FilterTransform		 An array containing a single transform 'filter_element' with an expression st... direct
name 1
String		 The name used throughout the view configuration to refer to the data object DataObject

Identifier and Mapping Information

Schema Source

  • from schema: https://w3id.org/scverse/vega-scverse/specification

Mappings

Mapping Type Mapped Value
self vega_scverse:BaseTableObject
native vega_scverse:BaseTableObject

LinkML Source

Direct

name: BaseTableObject
description: AnnData Table object stream.
from_schema: https://w3id.org/scverse/vega-scverse/specification
is_a: DataObject
attributes:
  format:
    name: format
    from_schema: https://w3id.org/scverse/vega-scverse/data
    domain_of:
    - DataObject
    - SpatialDataObject
    - BaseTableObject
    - SpatialDataElementObject
    range: ElementFormat
    required: true
  source:
    name: source
    description: "The source of the SpatialData element. Must be the name / identifier\
      \ of a SpatialData Object in the \nview configuration."
    from_schema: https://w3id.org/scverse/vega-scverse/data
    rank: 1000
    domain_of:
    - BaseTableObject
    - SpatialDataElementObject
    required: true
    pattern: ^(.*_)?[0-9a-fA-F]{8}-[0-9a-fA-F]{4}-[0-9a-fA-F]{4}-[0-9a-fA-F]{4}-[0-9a-fA-F]{12}$
  transform:
    name: transform
    description: 'An array containing a single transform ''filter_element'' with an
      expression stating which table to obtain

      from the source SpatialData object stream.'
    from_schema: https://w3id.org/scverse/vega-scverse/data
    rank: 1000
    domain_of:
    - BaseTableObject
    - SpatialDataElementObject
    range: FilterTransform
    required: true
    multivalued: true

Induced

name: BaseTableObject
description: AnnData Table object stream.
from_schema: https://w3id.org/scverse/vega-scverse/specification
is_a: DataObject
attributes:
  format:
    name: format
    from_schema: https://w3id.org/scverse/vega-scverse/data
    alias: format
    owner: BaseTableObject
    domain_of:
    - DataObject
    - SpatialDataObject
    - BaseTableObject
    - SpatialDataElementObject
    range: ElementFormat
    required: true
  source:
    name: source
    description: "The source of the SpatialData element. Must be the name / identifier\
      \ of a SpatialData Object in the \nview configuration."
    from_schema: https://w3id.org/scverse/vega-scverse/data
    rank: 1000
    alias: source
    owner: BaseTableObject
    domain_of:
    - BaseTableObject
    - SpatialDataElementObject
    range: string
    required: true
    pattern: ^(.*_)?[0-9a-fA-F]{8}-[0-9a-fA-F]{4}-[0-9a-fA-F]{4}-[0-9a-fA-F]{4}-[0-9a-fA-F]{12}$
  transform:
    name: transform
    description: 'An array containing a single transform ''filter_element'' with an
      expression stating which table to obtain

      from the source SpatialData object stream.'
    from_schema: https://w3id.org/scverse/vega-scverse/data
    rank: 1000
    alias: transform
    owner: BaseTableObject
    domain_of:
    - BaseTableObject
    - SpatialDataElementObject
    range: FilterTransform
    required: true
    multivalued: true
  name:
    name: name
    description: "The name used throughout the view configuration to refer to the\
      \ data object. It is an arbitrary string \nfollowed by an underscore and pseudo\
      \ UUID."
    from_schema: https://w3id.org/scverse/vega-scverse/data
    rank: 1000
    alias: name
    owner: BaseTableObject
    domain_of:
    - DataObject
    - Scale
    range: string
    required: true
    pattern: ^(.*_)?[0-9a-fA-F]{8}-[0-9a-fA-F]{4}-[0-9a-fA-F]{4}-[0-9a-fA-F]{4}-[0-9a-fA-F]{12}$